Farm animal proteomics 2013 : : Proceedings of the 4th Management Committee Meeting and 3rd Meeting of Working Groups 1, 2 & 3 of COST Action FA1002 Košice, Slovakia - 25-26 April 2013 / / edited by André de Almeida, David Eckersall, Elena Bencurova, Saskia Dolinska, Patrik Mlynarcik, Miroslava Vincova, Mangesh Bhide.

• HerausgeberIn: de Almeida, André.; Eckersall, David.; Bencurova, Elena.; Dolinska, Saskia.; Mlynarcik, Patrik.; Vincova, Miroslava.; Bhide, Mangesh.
• Place / Publishing House: Wageningen : : Wageningen Academic Publishers :, Imprint: Wageningen Academic Publishers,, 2013.
• Year of Publication: 2013
• Edition: 1st ed. 2013.
• Language: English
• Physical Description: 1 online resource (297 p.)
• Notes: Description based upon print version of record.

Proteomics may be defined as the large-scale study of the proteome, i.e. a set of proteins being expressed in a certain fluid, tissue, organ or organism. Although still of limited and restricted use in most areas of farm animal and veterinary research, proteomics potential is unequivocal holding a significant promise in applications such as vaccine and drug development, animal product quality, physiology or toxicology. Nevertheless, proteomics use has been growing steadily during the last 2-3 years and, as time goes by; proteomics-based studies are more and more common, not just to scientists but to the general public, unraveling their full potential. This book reflects the will of a group of scientists that merge innovation with excellence of research and to whom the dissemination of knowledge and innovation through cooperation is a key essential point. It will be of interest to scientists at the early stages of their careers as well as to researchers well established in the field and to whom proteomics may be the necessary next step towards more in-depth research activities. By providing a collection of diverse scientific interests, Farm Animal Proteomics 2013 is also a witness to the vitality of the area and the importance it holds to animal and food research, to science, industry, government agencies, the consumer and ultimately the society as a whole.

Table of Contents

""The Cost Organisation""; ""Editors""; ""Scientific committee for the book of proceedings""; ""Table of contents""; ""Farm animal proteomics: going to the European capital of culture 2013""; ""Part I Invited plenary communications""; ""Mining deeper into the proteome: pros and cons of pre-fractionation and depletion""; ""References""; ""Detection and annotation of common posttranslational modifications in mass spectrometry data""; ""Objectives""; ""Material and methods""; ""Results and discussion""; ""References""; ""Applied bioinformatics in the structural, postgenomic era""; ""Objectives""

""Material and methods""""Results and discussion""; ""Acknowledgements""; ""References""; ""PTMomics � a potpourri of experimental approaches""; ""References""; ""Gel-free quantitative proteomics approaches, current status""; ""New proteomics strategies applied to clinical studies""; ""Neuro-immune proteomic crosstalk in health and disease: partners in love, partners in divorce""; ""Acknowledgements""; ""Top-down proteomics: 2D gels are an integral part of the process""; ""References""; ""MALDI imaging mass spectrometry: applications, limitations and potential""; ""References""

""Parasiteand host-derived proteins involved in African trypanosome brain invasion and dysfunction""""Proteomics at the host: pathogen interface""; ""Microbial proteomics in food safety and animal welfare""; ""References""; ""The search of stress markers in porcine by using proteomics""; ""Acknowledgements""; ""References""; ""Quest for biomarkers of the lean-to-fat ratio by proteomics in beef production""; ""References""; ""The LEXSY platform for recombinant protein expression""; ""References""; ""Part II Advancing methodology for farm animal proteomics and bioinformatics""

""Data-independent acquisition strategies for quantitative proteomics""""Objectives""; ""Material and methods""; ""Results and discussion""; ""Acknowledgements""; ""References""; ""Small intestinal response to enterotoxigenic Escherichia coli infection in pigs as revealed by label free UPLC/MSE proteomics ""; ""Objectives""; ""Material and methods""; ""Results and discussion""; ""Acknowledgements""; ""References""; ""Rapid protein production of Atlantic Salmon, Salmo salar, serum amyloid A (SAA) in an inducible Leishmania tarentolae expression system ""; ""Introduction""

""Materials and methods""""Results and discussion""; ""Conclusion""; ""Acknowledgements""; ""References""; ""Proteomic profiling of cerebrospinal fluid in canine degenerative myelopathy""; ""Objectives""; ""Material and methods""; ""Results and discussion""; ""References""; ""Automatic prediction of PTMs in Ehrlichia ruminantium � creating new datasets for Quickmod analyses ""; ""Objectives""; ""Material and methods""; ""Results and discussion""; ""Acknowledgements""; ""References""; ""Tandem mass spectrometry for species recognition and phenotyping in fish""; ""Objectives""

""Material and methods""