Systems Analytics and Integration of Big Omics Data

A “genotype"" is essentially an organism's full hereditary information which is obtained from its parents. A ""phenotype"" is an organism's actual observed physical and behavioral properties. These may include traits such as morphology, size, height, eye color...

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Year of Publication:2020
Language:English
Physical Description:1 electronic resource (202 p.)
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spelling Hardiman, Gary auth
Systems Analytics and Integration of Big Omics Data
MDPI - Multidisciplinary Digital Publishing Institute 2020
1 electronic resource (202 p.)
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A “genotype"" is essentially an organism's full hereditary information which is obtained from its parents. A ""phenotype"" is an organism's actual observed physical and behavioral properties. These may include traits such as morphology, size, height, eye color, metabolism, etc. One of the pressing challenges in computational and systems biology is genotype-to-phenotype prediction. This is challenging given the amount of data generated by modern Omics technologies. This “Big Data” is so large and complex that traditional data processing applications are not up to the task. Challenges arise in collection, analysis, mining, sharing, transfer, visualization, archiving, and integration of these data. In this Special Issue, there is a focus on the systems-level analysis of Omics data, recent developments in gene ontology annotation, and advances in biological pathways and network biology. The integration of Omics data with clinical and biomedical data using machine learning is explored. This Special Issue covers new methodologies in the context of gene–environment interactions, tissue-specific gene expression, and how external factors or host genetics impact the microbiome.
English
precision medicine informatics
drug sensitivity
chromatin modification
cell lines
biocuration
neurodegeneration
multivariate analysis
artificial intelligence
epigenetics
missing data
sequencing
clinical data
class imbalance
integrative analytics
algorithm development for network integration
deep phenotype
non-omics data
feature selection
Gene Ontology
miRNA-gene expression networks
omics data
plot visualization
Alzheimer's disease
tissue classification
epidemiological data
proteomic analysis
genotype
RNA expression
indirect effect
multi-omics
dementia
multiomics integration
data integration
phenomics
network topology analysis
challenges
transcriptome
enrichment analysis
regulatory genomics
scalability
heterogeneous data
systemic lupus erythematosus
database
microtubule-associated protein tau
disease variants
genomics
joint modeling
distance correlation
annotation
phenotype
direct effect
curse of dimensionality
gene-environment interactions
logic forest
machine learning
KEGG pathways
multivariate causal mediation
amyloid-beta
bioinformatics pipelines
support vector machine
pharmacogenomics
candidate genes
tissue-specific expressed genes
cognitive impairment
causal inference
3-03928-744-3
language English
format eBook
author Hardiman, Gary
spellingShingle Hardiman, Gary
Systems Analytics and Integration of Big Omics Data
author_facet Hardiman, Gary
author_variant g h gh
author_sort Hardiman, Gary
title Systems Analytics and Integration of Big Omics Data
title_full Systems Analytics and Integration of Big Omics Data
title_fullStr Systems Analytics and Integration of Big Omics Data
title_full_unstemmed Systems Analytics and Integration of Big Omics Data
title_auth Systems Analytics and Integration of Big Omics Data
title_new Systems Analytics and Integration of Big Omics Data
title_sort systems analytics and integration of big omics data
publisher MDPI - Multidisciplinary Digital Publishing Institute
publishDate 2020
physical 1 electronic resource (202 p.)
isbn 3-03928-745-1
3-03928-744-3
illustrated Not Illustrated
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