Genome informatics 2009 : proceedings of the 9th annual International Workshop on Bioinformatics and Systems Biology (IBSB 2009) : Boston University, Boston, USA, 27-29 July 2009 / / editors, Charles DeLisi ... [et al.].

• Superior document: Genome informatics series, vol. 22
• Author: International Workshop on Bioinformatics and Systems Biology Boston, Mass.); Edda Klipp
• TeilnehmendeR: DeLisi, Charles, 1941-; International Workshop on Bioinformatics and Systems Biology
• Year of Publication: 2010
• Language: English
• Series: Genome informatics series ; no. 22.
• Physical Description: 1 online resource (230 p.)
• Notes: Description based upon print version of record.

This volume contains 17 peer-reviewed papers based on the presentations at the 9th Annual International Workshop on Bioinformatics and Systems Biology (IBSB 2009) held at the Life Science Engineering Building of Boston University from July 27 to 29, 2009. This workshop started in 2001 as a platform for doctoral students and young researchers to present and discuss their research results and approaches in bioinformatics and systems biology.It is part of a collaborative educational program involving leading institutions and leaders committed to the following institutions and programs: Boston Uni

Table of Contents

Structural features and evolution of protein-protein interactions / J. von Eichborn, S. Gunther & R. Preissner -- Graphical analysis and experimental evaluation of Saccharomyces cerevisiae P[symbol] and P[symbol] promoter region / S. Gerber ... [et al.] -- Strategies of non-sequential protein structure alignments / A. Guerler & E.-W. Knapp -- Active pathway identification and classification with probabilistic ensembles / T. Hancock & H. Mamitsuka -- The importance of compartmentalization in metabolic flux models : yeast as an ecosystem of organelles / N. Klitgord & D. Segre -- A state space representation of VAR models with sparse learning for dynamic gene networks / K. Kojima ... [et al.] -- Formal representation of the high osmolarity glycerol pathway in yeast / C. Kuhn ... [et al.] -- Prediction of regulatory transcription factors in T helper cell differentiation and maintenance / Y.-H. Lee ... [et al.] -- Annotating gene functions with integrative spectral clustering on microarray expressions and sequences / L. Li ... [et al.] -- A novel meta-analysis approach of cancer transcriptomes reveals prevailing transcriptional networks in cancer cells / A. Niida ... [et al.] -- New kernel methods for phenotype prediction from genotype data / R. Onuki, T. Shibuya & M. Kanehisa -- Efficient and detailed model of the local Ca[symbol] release unit in the ventricular cardiac myocyte / T. Schendel & M. Falcke -- Co-evolution of metabolism and protein sequences / M. Schutte ... [et al.] -- Characterization and classification of adverse drug interactions / M. Takarabe ... [et al.] -- Analysis and prediction of nutritional requirements using structural properties of metabolic networks and support vector machines / T. Tamura ... [et al.] -- Analysis of a lipid biosynthesis protein family and phospholipid structural variations / M. Tanaka ... [et al.] -- CaMPDB : A resource for calpain and modulatory proteolysis / D. duVerle ... [et al.].