Genetics of Biodegradation and Bioremediation
Many biodegradation pathways, both aerobic and anaerobic, have already been characterised, and the phylogenetic relationships among catabolic genes within them have been studied. However, new biodegradation activities and their coding genes are continuously being reported, including those involved i...
Saved in:
HerausgeberIn: | |
---|---|
Sonstige: | |
Year of Publication: | 2020 |
Language: | English |
Physical Description: | 1 electronic resource (240 p.) |
Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
id |
993545859904498 |
---|---|
ctrlnum |
(CKB)5400000000040877 (oapen)https://directory.doabooks.org/handle/20.500.12854/68597 (EXLCZ)995400000000040877 |
collection |
bib_alma |
record_format |
marc |
spelling |
Santero, Eduardo edt Genetics of Biodegradation and Bioremediation Basel, Switzerland MDPI - Multidisciplinary Digital Publishing Institute 2020 1 electronic resource (240 p.) text txt rdacontent computer c rdamedia online resource cr rdacarrier Many biodegradation pathways, both aerobic and anaerobic, have already been characterised, and the phylogenetic relationships among catabolic genes within them have been studied. However, new biodegradation activities and their coding genes are continuously being reported, including those involved in the catabolism of emerging contaminants and those generally regarded as non-biodegradable. Gene regulation is also an important issue for the efficient biodegradation of contaminants. Specific induction by the substrate and over-imposed global regulatory networks adjust the expression of the biodegradation genes to meet bacterial physiological needs. New biodegradation pathways can be assembled in a particular strain or in a bacterial consortium by recruiting biodegradation genes from different origins through horizontal gene transfer. The abundance and diversity of biodegradation genes, analysed by either genomic or metagenomic approaches, constitute valuable indicators of the biodegradation potential of a particular environmental niche. This knowledge paves the way to systems metabolic engineering approaches to valorise biowaste for the production of value-added products. English Research & information: general bicssc Biology, life sciences bicssc tetralin Sphingopyxis granuli strain TFA Rhodococcus sp. strain TFB redox proteins carbon catabolite repression plastics biodegradation sustainability upcycling biotransformations polyethylene terephthalate terephthalate ethylene glycol biphenyl bph gene integrative conjugative element genome sequence LysR transcription factor Acinetobacter LTTR benzoate muconate synergism biosensor naphthalene toluene hydrocarbons plant growth promotion bioremediation Pseudomonas soil pollution phytoremediation rhizoremediation diesel bacteria consortium metagenomics PAHs TPH regulation anaerobic Azoarcus promoter architecture bioethanol furfural ALE AraC sterols bile acids steroid hormones 9,10-seco pathway 4,5-seco pathway 2,3-seco pathway xenobiotics Carbaryl horizontal gene transfer mobile genetic elements transposons integrative conjugative elements pathway assembly evolution Sphingopyxis lindanitolerans pesticide complete genome sequence pangenome γ-HCH degradation lin genes testosterone steroid catabolism transcriptomic valorisation catabolic pathway mobile DNA anaerobic biodegradation gene regulation 3-03936-236-4 3-03936-237-2 Díaz, Eduardo edt Santero, Eduardo oth Díaz, Eduardo oth |
language |
English |
format |
eBook |
author2 |
Díaz, Eduardo Santero, Eduardo Díaz, Eduardo |
author_facet |
Díaz, Eduardo Santero, Eduardo Díaz, Eduardo |
author2_variant |
e s es e d ed |
author2_role |
HerausgeberIn Sonstige Sonstige |
title |
Genetics of Biodegradation and Bioremediation |
spellingShingle |
Genetics of Biodegradation and Bioremediation |
title_full |
Genetics of Biodegradation and Bioremediation |
title_fullStr |
Genetics of Biodegradation and Bioremediation |
title_full_unstemmed |
Genetics of Biodegradation and Bioremediation |
title_auth |
Genetics of Biodegradation and Bioremediation |
title_new |
Genetics of Biodegradation and Bioremediation |
title_sort |
genetics of biodegradation and bioremediation |
publisher |
MDPI - Multidisciplinary Digital Publishing Institute |
publishDate |
2020 |
physical |
1 electronic resource (240 p.) |
isbn |
3-03936-236-4 3-03936-237-2 |
illustrated |
Not Illustrated |
work_keys_str_mv |
AT santeroeduardo geneticsofbiodegradationandbioremediation AT diazeduardo geneticsofbiodegradationandbioremediation |
status_str |
n |
ids_txt_mv |
(CKB)5400000000040877 (oapen)https://directory.doabooks.org/handle/20.500.12854/68597 (EXLCZ)995400000000040877 |
carrierType_str_mv |
cr |
is_hierarchy_title |
Genetics of Biodegradation and Bioremediation |
author2_original_writing_str_mv |
noLinkedField noLinkedField noLinkedField |
_version_ |
1787548866847965184 |
fullrecord |
<?xml version="1.0" encoding="UTF-8"?><collection xmlns="http://www.loc.gov/MARC21/slim"><record><leader>04574nam-a2201249z--4500</leader><controlfield tag="001">993545859904498</controlfield><controlfield tag="005">20231214133522.0</controlfield><controlfield tag="006">m o d </controlfield><controlfield tag="007">cr|mn|---annan</controlfield><controlfield tag="008">202105s2020 xx |||||o ||| 0|eng d</controlfield><datafield tag="035" ind1=" " ind2=" "><subfield code="a">(CKB)5400000000040877</subfield></datafield><datafield tag="035" ind1=" " ind2=" "><subfield code="a">(oapen)https://directory.doabooks.org/handle/20.500.12854/68597</subfield></datafield><datafield tag="035" ind1=" " ind2=" "><subfield code="a">(EXLCZ)995400000000040877</subfield></datafield><datafield tag="041" ind1="0" ind2=" "><subfield code="a">eng</subfield></datafield><datafield tag="100" ind1="1" ind2=" "><subfield code="a">Santero, Eduardo</subfield><subfield code="4">edt</subfield></datafield><datafield tag="245" ind1="1" ind2="0"><subfield code="a">Genetics of Biodegradation and Bioremediation</subfield></datafield><datafield tag="260" ind1=" " ind2=" "><subfield code="a">Basel, Switzerland</subfield><subfield code="b">MDPI - Multidisciplinary Digital Publishing Institute</subfield><subfield code="c">2020</subfield></datafield><datafield tag="300" ind1=" " ind2=" "><subfield code="a">1 electronic resource (240 p.)</subfield></datafield><datafield tag="336" ind1=" " ind2=" "><subfield code="a">text</subfield><subfield code="b">txt</subfield><subfield code="2">rdacontent</subfield></datafield><datafield tag="337" ind1=" " ind2=" "><subfield code="a">computer</subfield><subfield code="b">c</subfield><subfield code="2">rdamedia</subfield></datafield><datafield tag="338" ind1=" " ind2=" "><subfield code="a">online resource</subfield><subfield code="b">cr</subfield><subfield code="2">rdacarrier</subfield></datafield><datafield tag="520" ind1=" " ind2=" "><subfield code="a">Many biodegradation pathways, both aerobic and anaerobic, have already been characterised, and the phylogenetic relationships among catabolic genes within them have been studied. However, new biodegradation activities and their coding genes are continuously being reported, including those involved in the catabolism of emerging contaminants and those generally regarded as non-biodegradable. Gene regulation is also an important issue for the efficient biodegradation of contaminants. Specific induction by the substrate and over-imposed global regulatory networks adjust the expression of the biodegradation genes to meet bacterial physiological needs. New biodegradation pathways can be assembled in a particular strain or in a bacterial consortium by recruiting biodegradation genes from different origins through horizontal gene transfer. The abundance and diversity of biodegradation genes, analysed by either genomic or metagenomic approaches, constitute valuable indicators of the biodegradation potential of a particular environmental niche. This knowledge paves the way to systems metabolic engineering approaches to valorise biowaste for the production of value-added products.</subfield></datafield><datafield tag="546" ind1=" " ind2=" "><subfield code="a">English</subfield></datafield><datafield tag="650" ind1=" " ind2="7"><subfield code="a">Research & information: general</subfield><subfield code="2">bicssc</subfield></datafield><datafield tag="650" ind1=" " ind2="7"><subfield code="a">Biology, life sciences</subfield><subfield code="2">bicssc</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">tetralin</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">Sphingopyxis granuli strain TFA</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">Rhodococcus sp. strain TFB</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">redox proteins</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">carbon catabolite repression</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">plastics</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">biodegradation</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">sustainability</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">upcycling</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">biotransformations</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">polyethylene terephthalate</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">terephthalate</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">ethylene glycol</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">biphenyl</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">bph gene</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">integrative conjugative element</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">genome sequence</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">LysR</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">transcription factor</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">Acinetobacter</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">LTTR</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">benzoate</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">muconate</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">synergism</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">biosensor</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">naphthalene</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">toluene</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">hydrocarbons</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">plant growth promotion</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">bioremediation</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">Pseudomonas</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">soil pollution</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">phytoremediation</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">rhizoremediation</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">diesel</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">bacteria</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">consortium</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">metagenomics</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">PAHs</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">TPH</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">regulation</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">anaerobic</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">Azoarcus</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">promoter architecture</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">bioethanol</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">furfural</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">ALE</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">AraC</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">sterols</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">bile acids</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">steroid hormones</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">9,10-seco pathway</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">4,5-seco pathway</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">2,3-seco pathway</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">xenobiotics</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">Carbaryl</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">horizontal gene transfer</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">mobile genetic elements</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">transposons</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">integrative conjugative elements</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">pathway assembly</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">evolution</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">Sphingopyxis lindanitolerans</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">pesticide</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">complete genome sequence</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">pangenome</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">γ-HCH degradation</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">lin genes</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">testosterone</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">steroid</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">catabolism</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">transcriptomic</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">valorisation</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">catabolic pathway</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">mobile DNA</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">anaerobic biodegradation</subfield></datafield><datafield tag="653" ind1=" " ind2=" "><subfield code="a">gene regulation</subfield></datafield><datafield tag="776" ind1=" " ind2=" "><subfield code="z">3-03936-236-4</subfield></datafield><datafield tag="776" ind1=" " ind2=" "><subfield code="z">3-03936-237-2</subfield></datafield><datafield tag="700" ind1="1" ind2=" "><subfield code="a">Díaz, Eduardo</subfield><subfield code="4">edt</subfield></datafield><datafield tag="700" ind1="1" ind2=" "><subfield code="a">Santero, Eduardo</subfield><subfield code="4">oth</subfield></datafield><datafield tag="700" ind1="1" ind2=" "><subfield code="a">Díaz, Eduardo</subfield><subfield code="4">oth</subfield></datafield><datafield tag="906" ind1=" " ind2=" "><subfield code="a">BOOK</subfield></datafield><datafield tag="ADM" ind1=" " ind2=" "><subfield code="b">2023-12-15 05:56:33 Europe/Vienna</subfield><subfield code="f">system</subfield><subfield code="c">marc21</subfield><subfield code="a">2022-04-04 09:22:53 Europe/Vienna</subfield><subfield code="g">false</subfield></datafield><datafield tag="AVE" ind1=" " ind2=" "><subfield code="i">DOAB Directory of Open Access Books</subfield><subfield code="P">DOAB Directory of Open Access Books</subfield><subfield code="x">https://eu02.alma.exlibrisgroup.com/view/uresolver/43ACC_OEAW/openurl?u.ignore_date_coverage=true&portfolio_pid=5338070510004498&Force_direct=true</subfield><subfield code="Z">5338070510004498</subfield><subfield code="b">Available</subfield><subfield code="8">5338070510004498</subfield></datafield></record></collection> |