Pacific Symposium On Biocomputing 2014.

• Author: Altman, Russ B.
• TeilnehmendeR: Dunker, A Keith.; Hunter, Lawrence.; Ritchie, Marylyn D.; Murray, Tiffany A.; Klein, Teri E.
• Place / Publishing House: Singapore : : World Scientific Publishing Company,, 2013.; ©2014.
• Year of Publication: 2013
• Edition: 1st ed.
• Language: English
• Physical Description: 1 online resource (436 pages)

Table of Contents

Intro -- 0psb-preface-14-rba.pdf -- 1cp-all -- 0cp-intro-rev.pdf -- aguiar-rev -- badea -- 1. Introduction and motivation -- 2. Data and preprocessing -- 2.1. The TCGA AML dataset -- 2.2. Generalized mutations -- 2.3. Protein-to-protein interaction data -- 3. Proteins mutated in AML form pp interaction cliques -- 4. Joint analysis of gene expression data and mutations using pp interaction data -- 4.1. The joint clustering of expression and mutation interactor data -- 4.2. The dimensionality of the factorization -- 4.3. Significant sample-specific mutations -- 5. Conclusions -- 6. Acknowledgments -- chaibubneto (1) -- gitter-rev -- hu -- mayba -- min-rev -- morgan -- 2cad-all -- 0intro-cdr-rev -- blucher -- brubaker -- ng -- yang -- yera-rev -- zhu -- 3pleiotropy-all -- 0Pleiotropy_Proceedings_Introduction.pdf -- darabos-rev -- hall -- philip -- 4pm-all -- 0pm-intro-rev -- daneshjou -- martin -- parikh -- patwardhan-rev -- 1. Introduction -- 2. Methods -- 2.1. Subject Samples -- 2.2. Genomic Library Construction, Exome Sequencing, Alignment and Variant Calling -- 2.3. Problematic Regions of the Genome -- 2.4. Case Control Analysis -- 3. Results -- 4. Discussion -- 5text-all -- 0intro-text -- clark -- funk -- han -- komandurelayavilli -- liu (1) -- malinowski (2) -- vembu-rev -- zitnik (1) -- 1NoncodingRNA_workshop_PSB2014.pdf -- 2training -- Untitled.